RNA-fold
How to fold RNA? An ML approach.
The code base here and here is a collection of code that I worked on to design and test different folding algorithms for predicting how an RNA sequence would fold.
A schematic of the Gillespie type algorithm that I implemented to predict how a given RNA sequence would fold.
I worked on this research project as a Researh Rotation Student in Fall 2019 in the Sulc group at Arizona State.